J3_1J5E_006

3D structure

PDB id

1J5E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GGGAACCC*GGGGUGC*GAGCCC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1J5E|1|A|G|1002
1J5E|1|A|G|1003
1J5E|1|A|G|1003|||A
1J5E|1|A|A|1004
1J5E|1|A|A|1005
1J5E|1|A|C|1006
1J5E|1|A|C|1007
1J5E|1|A|C|1008
*
1J5E|1|A|G|1021
1J5E|1|A|G|1022
1J5E|1|A|G|1023
1J5E|1|A|G|1024
1J5E|1|A|U|1025
1J5E|1|A|G|1026
1J5E|1|A|C|1027
*
1J5E|1|A|G|1034
1J5E|1|A|A|1035
1J5E|1|A|G|1036
1J5E|1|A|C|1037
1J5E|1|A|C|1038
1J5E|1|A|C|1039

Current chains

Chain A

16S ribosomal RNA

Nearby chains