J3_1JZX_001

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAGC*GGA*UAACCGAA

Length

16 nucleotides

Bulged bases

1JZX|1|A|G|699, 1JZX|1|A|A|802, 1JZX|1|A|C|803, 1JZX|1|A|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZX|1|A|U|696
1JZX|1|A|G|697
1JZX|1|A|A|698
1JZX|1|A|G|699
1JZX|1|A|C|700
*
1JZX|1|A|G|788
1JZX|1|A|G|789
1JZX|1|A|A|790
*
1JZX|1|A|U|800
1JZX|1|A|A|801
1JZX|1|A|A|802
1JZX|1|A|C|803
1JZX|1|A|C|804
1JZX|1|A|G|805
1JZX|1|A|A|806
1JZX|1|A|A|807

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

Ribosomal Protein L4

Chain L

Ribosomal Protein L22