J3_1JZX_006

3D structure

PDB id

1JZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUG*CGGCCGUAACUAUAACGGUCCUAAGGUAG*CGAAAG

Length

38 nucleotides

Bulged bases

1JZX|1|A|A|1895, 1JZX|1|A|C|1897, 1JZX|1|A|A|1954

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZX|1|A|C|1825
1JZX|1|A|U|1826
1JZX|1|A|G|1827
*
1JZX|1|A|C|1888
1JZX|1|A|G|1889
1JZX|1|A|G|1890
1JZX|1|A|C|1891
1JZX|1|A|C|1892
1JZX|1|A|G|1893
1JZX|1|A|U|1894
1JZX|1|A|A|1895
1JZX|1|A|A|1896
1JZX|1|A|C|1897
1JZX|1|A|U|1898
1JZX|1|A|A|1899
1JZX|1|A|U|1900
1JZX|1|A|A|1901
1JZX|1|A|A|1902
1JZX|1|A|C|1903
1JZX|1|A|G|1904
1JZX|1|A|G|1905
1JZX|1|A|U|1906
1JZX|1|A|C|1907
1JZX|1|A|C|1908
1JZX|1|A|U|1909
1JZX|1|A|A|1910
1JZX|1|A|A|1911
1JZX|1|A|G|1912
1JZX|1|A|G|1913
1JZX|1|A|U|1914
1JZX|1|A|A|1915
1JZX|1|A|G|1916
*
1JZX|1|A|C|1950
1JZX|1|A|G|1951
1JZX|1|A|A|1952
1JZX|1|A|A|1953
1JZX|1|A|A|1954
1JZX|1|A|G|1955

Current chains

Chain A

23S rRNA

Nearby chains