J3_1JZZ_001

3D structure

PDB id

1JZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UGAGC*GGA*UAACCGAA

Length

16 nucleotides

Bulged bases

1JZZ|1|A|G|699, 1JZZ|1|A|A|802, 1JZZ|1|A|C|803, 1JZZ|1|A|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1JZZ|1|A|U|696
1JZZ|1|A|G|697
1JZZ|1|A|A|698
1JZZ|1|A|G|699
1JZZ|1|A|C|700
*
1JZZ|1|A|G|788
1JZZ|1|A|G|789
1JZZ|1|A|A|790
*
1JZZ|1|A|U|800
1JZZ|1|A|A|801
1JZZ|1|A|A|802
1JZZ|1|A|C|803
1JZZ|1|A|C|804
1JZZ|1|A|G|805
1JZZ|1|A|A|806
1JZZ|1|A|A|807

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

Ribosomal Protein L4

Chain L

Ribosomal Protein L22