J3_1KQS_004

3D structure

PDB id

1KQS (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGA*UCUAAGAAAA*UUAC

Length

17 nucleotides

Bulged bases

1KQS|1|0|A|1192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1KQS|1|0|G|1159
1KQS|1|0|G|1160
1KQS|1|0|A|1161
*
1KQS|1|0|U|1185
1KQS|1|0|C|1186
1KQS|1|0|U|1187
1KQS|1|0|A|1188
1KQS|1|0|A|1189
1KQS|1|0|G|1190
1KQS|1|0|A|1191
1KQS|1|0|A|1192
1KQS|1|0|A|1193
1KQS|1|0|A|1194
*
1KQS|1|0|U|1205
1KQS|1|0|U|1206
1KQS|1|0|A|1207
1KQS|1|0|C|1208

Current chains

Chain 0

23S RRNA

Nearby chains

Chain G

RIBOSOMAL PROTEIN L10