3D structure

PDB id
1M90 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal structure of CCA-Phe-caproic acid-biotin and sparsomycin bound to the 50S ribosomal subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GGA*UCUAAGAAAA*UUAC
Length
17 nucleotides
Bulged bases
1M90|1|A|A|1192
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1M90|1|A|G|1159
1M90|1|A|G|1160
1M90|1|A|A|1161
*
1M90|1|A|U|1185
1M90|1|A|C|1186
1M90|1|A|U|1187
1M90|1|A|A|1188
1M90|1|A|A|1189
1M90|1|A|G|1190
1M90|1|A|A|1191
1M90|1|A|A|1192
1M90|1|A|A|1193
1M90|1|A|A|1194
*
1M90|1|A|U|1205
1M90|1|A|U|1206
1M90|1|A|A|1207
1M90|1|A|C|1208

Current chains

Chain A
23S RRNA

Nearby chains

Chain I
RIBOSOMAL PROTEIN L10

Coloring options:

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