J3_1N34_006

3D structure

PDB id

1N34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer rna anticodon stem-loop mismatched at the first codon position

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

AGGGAACC*GGGUGCC*GGAGCCCU

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1N34|1|A|A|1001
1N34|1|A|G|1002
1N34|1|A|G|1003
1N34|1|A|G|1003|||A
1N34|1|A|A|1004
1N34|1|A|A|1005
1N34|1|A|C|1006
1N34|1|A|C|1007
*
1N34|1|A|G|1022
1N34|1|A|G|1023
1N34|1|A|G|1024
1N34|1|A|U|1025
1N34|1|A|G|1026
1N34|1|A|C|1027
1N34|1|A|C|1028
*
1N34|1|A|G|1033
1N34|1|A|G|1034
1N34|1|A|A|1035
1N34|1|A|G|1036
1N34|1|A|C|1037
1N34|1|A|C|1038
1N34|1|A|C|1039
1N34|1|A|U|1040

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains