3D structure

PDB id
1Q81 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of minihelix with 3' puromycin bound to A-site of the 50S ribosomal subunit.
Experimental method
X-RAY DIFFRACTION
Resolution
2.95 Å

Loop

Sequence
GGA*UCUAAGAAAAG*CUUAC
Length
19 nucleotides
Bulged bases
1Q81|1|A|A|1192
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1Q81|1|A|G|1159
1Q81|1|A|G|1160
1Q81|1|A|A|1161
*
1Q81|1|A|U|1185
1Q81|1|A|C|1186
1Q81|1|A|U|1187
1Q81|1|A|A|1188
1Q81|1|A|A|1189
1Q81|1|A|G|1190
1Q81|1|A|A|1191
1Q81|1|A|A|1192
1Q81|1|A|A|1193
1Q81|1|A|A|1194
1Q81|1|A|G|1195
*
1Q81|1|A|C|1204
1Q81|1|A|U|1205
1Q81|1|A|U|1206
1Q81|1|A|A|1207
1Q81|1|A|C|1208

Current chains

Chain A
23S ribosomal rna

Nearby chains

Chain I
Acidic ribosomal protein P0 homolog

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2908 s