J3_1Q86_004
3D structure
- PDB id
- 1Q86 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of CCA-Phe-cap-biotin bound simultaneously at half occupancy to both the A-site and P-site of the the 50S ribosomal Subunit.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGA*UCUAAGAAAA*UUAC
- Length
- 17 nucleotides
- Bulged bases
- 1Q86|1|A|A|1192
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1Q86|1|A|G|1159
1Q86|1|A|G|1160
1Q86|1|A|A|1161
*
1Q86|1|A|U|1185
1Q86|1|A|C|1186
1Q86|1|A|U|1187
1Q86|1|A|A|1188
1Q86|1|A|A|1189
1Q86|1|A|G|1190
1Q86|1|A|A|1191
1Q86|1|A|A|1192
1Q86|1|A|A|1193
1Q86|1|A|A|1194
*
1Q86|1|A|U|1205
1Q86|1|A|U|1206
1Q86|1|A|A|1207
1Q86|1|A|C|1208
Current chains
- Chain A
- 23S ribosomal rna
Nearby chains
- Chain I
- Acidic ribosomal protein P0 homolog
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