3D structure

PDB id
1VVJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.44 Å

Loop

Sequence
CACG*CGGUAAG*CGAGG
Length
16 nucleotides
Bulged bases
1VVJ|1|YA|A|2790
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1VVJ|1|YA|C|2789
1VVJ|1|YA|A|2790
1VVJ|1|YA|C|2791
1VVJ|1|YA|G|2792
*
1VVJ|1|YA|C|2804
1VVJ|1|YA|G|2805
1VVJ|1|YA|G|2807
1VVJ|1|YA|U|2808
1VVJ|1|YA|A|2809
1VVJ|1|YA|A|2810
1VVJ|1|YA|G|2811
*
1VVJ|1|YA|C|2889
1VVJ|1|YA|G|2891
1VVJ|1|YA|A|2892
1VVJ|1|YA|G|2893
1VVJ|1|YA|G|2894

Current chains

Chain YA
23S rRNA

Nearby chains

Chain YE
50S ribosomal protein L3

Coloring options:

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