J3_1VVJ_067

3D structure

PDB id

1VVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.44 Å

Loop

Sequence

UGGAAU*GGAACGCCGAUGG*CAG

Length

22 nucleotides

Bulged bases

1VVJ|1|XA|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VVJ|1|XA|U|672
1VVJ|1|XA|G|673
1VVJ|1|XA|G|674
1VVJ|1|XA|A|675
1VVJ|1|XA|A|676
1VVJ|1|XA|U|677
*
1VVJ|1|XA|G|713
1VVJ|1|XA|G|714
1VVJ|1|XA|A|715
1VVJ|1|XA|A|716
1VVJ|1|XA|C|717
1VVJ|1|XA|G|718
1VVJ|1|XA|C|719
1VVJ|1|XA|C|720
1VVJ|1|XA|G|721
1VVJ|1|XA|A|722
1VVJ|1|XA|U|723
1VVJ|1|XA|G|724
1VVJ|1|XA|G|725
*
1VVJ|1|XA|C|732
1VVJ|1|XA|A|733
1VVJ|1|XA|G|734

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XF

30S ribosomal protein S6

Chain XK

30S ribosomal protein S11

Chain XO

30S ribosomal protein S15

Chain XR

30S ribosomal protein S18

Chain YD

50S ribosomal protein L2