J3_1VW3_006

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCAAAGAUAG*CAAAG*CAAC

Length

19 nucleotides

Bulged bases

1VW3|1|A|U|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|G|1626
1VW3|1|A|C|1627
1VW3|1|A|A|1628
1VW3|1|A|A|1629
1VW3|1|A|A|1630
1VW3|1|A|G|1631
1VW3|1|A|A|1632
1VW3|1|A|U|1633
1VW3|1|A|A|1634
1VW3|1|A|G|1635
*
1VW3|1|A|C|1668
1VW3|1|A|A|1669
1VW3|1|A|A|1670
1VW3|1|A|A|1671
1VW3|1|A|G|1672
*
1VW3|1|A|C|1887
1VW3|1|A|A|1888
1VW3|1|A|A|1889
1VW3|1|A|C|1890

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial