3D structure

PDB id
1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UCG*CUAAU*AGACAA
Length
14 nucleotides
Bulged bases
1VW3|1|A|A|2093
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1VW3|1|A|U|1993
1VW3|1|A|C|1994
1VW3|1|A|G|1995
*
1VW3|1|A|C|2091
1VW3|1|A|U|2092
1VW3|1|A|A|2093
1VW3|1|A|A|2094
1VW3|1|A|U|2095
*
1VW3|1|A|A|2249
1VW3|1|A|G|2250
1VW3|1|A|A|2251
1VW3|1|A|C|2252
1VW3|1|A|A|2253
1VW3|1|A|A|2254

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain B
54S ribosomal protein RML2, mitochondrial

Coloring options:

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