3D structure

PDB id
1VW3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial large ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
UAUAA*UCUAUAUUA*UUUAAUUA
Length
22 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1VW3|1|A|U|2972
1VW3|1|A|A|2973
1VW3|1|A|U|2974
1VW3|1|A|A|2975
1VW3|1|A|A|2976
*
1VW3|1|A|U|3013
1VW3|1|A|C|3014
1VW3|1|A|U|3015
1VW3|1|A|A|3016
1VW3|1|A|U|3017
1VW3|1|A|A|3018
1VW3|1|A|U|3019
1VW3|1|A|U|3020
1VW3|1|A|A|3021
*
1VW3|1|A|U|3030
1VW3|1|A|U|3031
1VW3|1|A|U|3032
1VW3|1|A|A|3033
1VW3|1|A|A|3034
1VW3|1|A|U|3035
1VW3|1|A|U|3036
1VW3|1|A|A|3037

Current chains

Chain A
21S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2226 s