J3_1VW3_015

3D structure

PDB id

1VW3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UA*UAAUAAUUAU*AAUUUA

Length

18 nucleotides

Bulged bases

1VW3|1|A|A|3155, 1VW3|1|A|U|3252, 1VW3|1|A|U|3253, 1VW3|1|A|U|3254

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1VW3|1|A|U|3130
1VW3|1|A|A|3131
*
1VW3|1|A|U|3147
1VW3|1|A|A|3148
1VW3|1|A|A|3149
1VW3|1|A|U|3150
1VW3|1|A|A|3151
1VW3|1|A|A|3152
1VW3|1|A|U|3153
1VW3|1|A|U|3154
1VW3|1|A|A|3155
1VW3|1|A|U|3156
*
1VW3|1|A|A|3250
1VW3|1|A|A|3251
1VW3|1|A|U|3252
1VW3|1|A|U|3253
1VW3|1|A|U|3254
1VW3|1|A|A|3255

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

54S ribosomal protein L9, mitochondrial