J3_1W2B_004

3D structure

PDB id

1W2B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Trigger Factor ribosome binding domain in complex with 50S

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGA*UCUAAGAAAA*UUAC

Length

17 nucleotides

Bulged bases

1W2B|1|0|A|1192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1W2B|1|0|G|1159
1W2B|1|0|G|1160
1W2B|1|0|A|1161
*
1W2B|1|0|U|1185
1W2B|1|0|C|1186
1W2B|1|0|U|1187
1W2B|1|0|A|1188
1W2B|1|0|A|1189
1W2B|1|0|G|1190
1W2B|1|0|A|1191
1W2B|1|0|A|1192
1W2B|1|0|A|1193
1W2B|1|0|A|1194
*
1W2B|1|0|U|1205
1W2B|1|0|U|1206
1W2B|1|0|A|1207
1W2B|1|0|C|1208

Current chains

Chain 0

23S RRNA

Nearby chains

Chain G

50S RIBOSOMAL PROTEIN L10E