J3_1XNR_006

3D structure

PDB id

1XNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAACC*GGGUGC*GAGCC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1XNR|1|A|G|1003
1XNR|1|A|A|1004
1XNR|1|A|A|1005
1XNR|1|A|C|1006
1XNR|1|A|C|1007
*
1XNR|1|A|G|1022
1XNR|1|A|G|1023
1XNR|1|A|G|1024
1XNR|1|A|U|1025
1XNR|1|A|G|1026
1XNR|1|A|C|1027
*
1XNR|1|A|G|1034
1XNR|1|A|A|1035
1XNR|1|A|G|1036
1XNR|1|A|C|1037
1XNR|1|A|C|1038

Current chains

Chain A

16S Ribosomal RNA

Nearby chains