J3_1Y0Q_001

3D structure

PDB id

1Y0Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an active group I ribozyme-product complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

ACAUA*UAGAAG*CGUAACAUAAU

Length

22 nucleotides

Bulged bases

1Y0Q|1|A|A|198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y0Q|1|A|A|196
1Y0Q|1|A|C|197
1Y0Q|1|A|A|198
1Y0Q|1|A|U|199
1Y0Q|1|A|A|200
*
1Y0Q|1|A|U|213
1Y0Q|1|A|A|214
1Y0Q|1|A|G|215
1Y0Q|1|A|A|216
1Y0Q|1|A|A|217
1Y0Q|1|A|G|218
*
1Y0Q|1|A|C|240
1Y0Q|1|A|G|241
1Y0Q|1|A|U|242
1Y0Q|1|A|A|243
1Y0Q|1|A|A|244
1Y0Q|1|A|C|245
1Y0Q|1|A|A|246
1Y0Q|1|A|U|247
1Y0Q|1|A|A|248
1Y0Q|1|A|A|249
1Y0Q|1|A|U|250

Current chains

Chain A

Group I ribozyme

Nearby chains