J3_1Y69_006

3D structure

PDB id

1Y69 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

3.33 Å

Loop

Sequence

AUUG*CUAAC*GGACCGU

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1Y69|1|0|A|2073
1Y69|1|0|U|2074
1Y69|1|0|U|2075
1Y69|1|0|G|2076
*
1Y69|1|0|C|2179
1Y69|1|0|U|2180
1Y69|1|0|A|2181
1Y69|1|0|A|2182
1Y69|1|0|C|2183
*
1Y69|1|0|G|2202
1Y69|1|0|G|2203
1Y69|1|0|A|2204
1Y69|1|0|C|2205
1Y69|1|0|C|2206
1Y69|1|0|G|2207
1Y69|1|0|U|2208

Current chains

Chain 0

23S ribosomal RNA

Nearby chains