3D structure

PDB id
1YI2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure Of Erythromycin Bound To The G2099A Mutant 50S Ribosomal Subunit Of Haloarcula Marismortui
Experimental method
X-RAY DIFFRACTION
Resolution
2.65 Å

Loop

Sequence
GGA*UCUAAGAAAA*UUAC
Length
17 nucleotides
Bulged bases
1YI2|1|0|A|1192
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1YI2|1|0|G|1159
1YI2|1|0|G|1160
1YI2|1|0|A|1161
*
1YI2|1|0|U|1185
1YI2|1|0|C|1186
1YI2|1|0|U|1187
1YI2|1|0|A|1188
1YI2|1|0|A|1189
1YI2|1|0|G|1190
1YI2|1|0|A|1191
1YI2|1|0|A|1192
1YI2|1|0|A|1193
1YI2|1|0|A|1194
*
1YI2|1|0|U|1205
1YI2|1|0|U|1206
1YI2|1|0|A|1207
1YI2|1|0|C|1208

Current chains

Chain 0
23S Ribosomal RNA

Nearby chains

Chain G
ACIDIC RIBOSOMAL PROTEIN P0 HOMOLOG
Chain I
50S RIBOSOMAL PROTEIN L11P

Coloring options:

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