J3_22TU_020
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGGGCGA*UCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 31 nucleotides
- Bulged bases
- 22TU|1|L5|G|4115, 22TU|1|L5|C|4116, 22TU|1|L5|U|4117, 22TU|1|L5|U|4118, 22TU|1|L5|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|L5|G|4091
22TU|1|L5|G|4092
22TU|1|L5|G|4093
22TU|1|L5|G|4094
22TU|1|L5|G|4095
22TU|1|L5|C|4096
22TU|1|L5|G|4097
22TU|1|L5|A|4098
*
22TU|1|L5|U|4111
22TU|1|L5|C|4112
22TU|1|L5|U|4113
22TU|1|L5|C|4114
22TU|1|L5|G|4115
22TU|1|L5|C|4116
22TU|1|L5|U|4117
22TU|1|L5|U|4118
22TU|1|L5|C|4119
22TU|1|L5|U|4120
22TU|1|L5|G|4121
22TU|1|L5|G|4122
22TU|1|L5|C|4123
22TU|1|L5|G|4124
22TU|1|L5|C|4125
22TU|1|L5|C|4126
22TU|1|L5|A|4127
22TU|1|L5|A|4128
22TU|1|L5|G|4129
*
22TU|1|L5|C|4155
22TU|1|L5|G|4156
22TU|1|L5|A|4157
22TU|1|L5|C|4158
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LG
- 60S ribosomal protein L7a
- Chain LZ
- 60S ribosomal protein L27
- Chain Lc
- 60S ribosomal protein L30
- Chain Lg
- 60S ribosomal protein L34
- Chain Lp
- 60S ribosomal protein L37a
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