J3_22TU_023

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UAUC*GUU*ACUAAUA

Length

14 nucleotides

Bulged bases

22TU|1|L5|A|4464, 22TU|1|L5|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|L5|U|4463
22TU|1|L5|A|4464
22TU|1|L5|U|4465
22TU|1|L5|C|4466
*
22TU|1|L5|G|4491
22TU|1|L5|U|4492
22TU|1|L5|U|4493
*
22TU|1|L5|A|4507
22TU|1|L5|C|4508
22TU|1|L5|U|4509
22TU|1|L5|A|4510
22TU|1|L5|A|4511
22TU|1|L5|U|4512
22TU|1|L5|A|4513

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23