J3_22TU_037
3D structure
- PDB id
- 22TU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with DHX29
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUUAAUUU*GGGAAACCUCAC*GGCUG
- Length
- 25 nucleotides
- Bulged bases
- 22TU|1|S2|G|1256, 22TU|1|S2|A|1258, 22TU|1|S2|A|1260
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
22TU|1|S2|C|1237
22TU|1|S2|U|1238
22TU|1|S2|U|1239
22TU|1|S2|A|1240
22TU|1|S2|A|1241
22TU|1|S2|U|1242
22TU|1|S2|U|1243
22TU|1|S2|U|1244
*
22TU|1|S2|G|1255
22TU|1|S2|G|1256
22TU|1|S2|G|1257
22TU|1|S2|A|1258
22TU|1|S2|A|1259
22TU|1|S2|A|1260
22TU|1|S2|C|1261
22TU|1|S2|C|1262
22TU|1|S2|U|1263
22TU|1|S2|C|1264
22TU|1|S2|A|1265
22TU|1|S2|C|1266
*
22TU|1|S2|G|1516
22TU|1|S2|G|1517
22TU|1|S2|C|1518
22TU|1|S2|U|1519
22TU|1|S2|G|1520
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SP
- 40S ribosomal protein S15
- Chain SS
- 40S ribosomal protein S18
- Chain SU
- 40S ribosomal protein S20
- Chain Sd
- 40S ribosomal protein S29
Coloring options: