J3_28ZV_011
3D structure
- PDB id
- 28ZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human 48S PIC with mRNA (non-Kozak)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- (OMC)CGGAC*GGGUG*UUAGAUG
- Length
- 18 nucleotides
- Bulged bases
- 28ZV|1|S2|G|1274, 28ZV|1|S2|G|1507, 28ZV|1|S2|U|1509
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
28ZV|1|S2|OMC|1272
28ZV|1|S2|C|1273
28ZV|1|S2|G|1274
28ZV|1|S2|G|1275
28ZV|1|S2|A|1276
28ZV|1|S2|C|1277
*
28ZV|1|S2|G|1320
28ZV|1|S2|G|1321
28ZV|1|S2|G|1322
28ZV|1|S2|U|1323
28ZV|1|S2|G|1324
*
28ZV|1|S2|U|1504
28ZV|1|S2|U|1505
28ZV|1|S2|A|1506
28ZV|1|S2|G|1507
28ZV|1|S2|A|1508
28ZV|1|S2|U|1509
28ZV|1|S2|G|1510
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain H
- Eukaryotic translation initiation factor 1A, X-chromosomal
- Chain SK
- 40S ribosomal protein S10
- Chain Sd
- 40S ribosomal protein S29
- Chain Sf
- Ubiquitin
Coloring options: