J3_2HHH_016

3D structure

PDB id

2HHH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of kasugamycin bound to the 30S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

AGGGAACCC*GGGGUGC*GAGCCCU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2HHH|1|A|A|979
2HHH|1|A|G|980
2HHH|1|A|G|981
2HHH|1|A|G|982
2HHH|1|A|A|983
2HHH|1|A|A|984
2HHH|1|A|C|985
2HHH|1|A|C|986
2HHH|1|A|C|987
*
2HHH|1|A|G|1000
2HHH|1|A|G|1001
2HHH|1|A|G|1002
2HHH|1|A|G|1003
2HHH|1|A|U|1004
2HHH|1|A|G|1005
2HHH|1|A|C|1006
*
2HHH|1|A|G|1017
2HHH|1|A|A|1018
2HHH|1|A|G|1019
2HHH|1|A|C|1020
2HHH|1|A|C|1021
2HHH|1|A|C|1022
2HHH|1|A|U|1023

Current chains

Chain A

16S ribosomal RNA

Nearby chains