J3_2HO7_001
3D structure
- PDB id
- 2HO7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-cleavage state of the Thermoanaerobacter tengcongensis glmS ribozyme bound to glucose-6-phosphate
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GG*UGAC*GAGACAUC
- Length
- 14 nucleotides
- Bulged bases
- 2HO7|1|B|G|55
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_2HO7_001 not in the Motif Atlas
- Geometric match to J3_3G9C_002
- Geometric discrepancy: 0.2989
- The information below is about J3_3G9C_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_60873.1
- Basepair signature
- cWW-cSH-tWW-F-tHS-F-cWW-tWS-cWW
- Number of instances in this motif group
- 1
Unit IDs
2HO7|1|A|G|7
2HO7|1|A|G|8
*
2HO7|1|B|U|33
2HO7|1|B|G|34
2HO7|1|B|A|35
2HO7|1|B|C|36
*
2HO7|1|B|G|53
2HO7|1|B|A|54
2HO7|1|B|G|55
2HO7|1|B|A|56
2HO7|1|B|C|57
2HO7|1|B|A|58
2HO7|1|B|U|59
2HO7|1|B|C|60
Current chains
- Chain A
- glmS ribozyme substrate RNA
- Chain B
- glmS ribozyme RNA
Nearby chains
No other chains within 10ÅColoring options: