J3_2O44_004

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAGGA*UUCAAAGAGUG*CUCACUG

Length

23 nucleotides

Bulged bases

2O44|1|A|A|1099

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|1064
2O44|1|A|A|1065
2O44|1|A|G|1066
2O44|1|A|G|1067
2O44|1|A|A|1068
*
2O44|1|A|U|1092
2O44|1|A|U|1093
2O44|1|A|C|1094
2O44|1|A|A|1095
2O44|1|A|A|1096
2O44|1|A|A|1097
2O44|1|A|G|1098
2O44|1|A|A|1099
2O44|1|A|G|1100
2O44|1|A|U|1101
2O44|1|A|G|1102
*
2O44|1|A|C|1111
2O44|1|A|U|1112
2O44|1|A|C|1113
2O44|1|A|A|1114
2O44|1|A|C|1115
2O44|1|A|U|1116
2O44|1|A|G|1117

Current chains

Chain A

23S rRNA

Nearby chains