J3_2O44_006

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAGG*CCGCAAAC*GUG

Length

16 nucleotides

Bulged bases

2O44|1|A|A|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|1319
2O44|1|A|A|1320
2O44|1|A|A|1321
2O44|1|A|G|1322
2O44|1|A|G|1323
*
2O44|1|A|C|1620
2O44|1|A|C|1621
2O44|1|A|G|1622
2O44|1|A|C|1623
2O44|1|A|A|1624
2O44|1|A|A|1625
2O44|1|A|A|1626
2O44|1|A|C|1627
*
2O44|1|A|G|1636
2O44|1|A|U|1637
2O44|1|A|G|1638

Current chains

Chain A

23S rRNA

Nearby chains