J3_2O44_014

3D structure

PDB id

2O44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUAAGG*CCGA*UAAG

Length

15 nucleotides

Bulged bases

2O44|1|A|A|1315

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O44|1|A|C|1311
2O44|1|A|G|1312
2O44|1|A|U|1313
2O44|1|A|A|1314
2O44|1|A|A|1315
2O44|1|A|G|1316
2O44|1|A|G|1317
*
2O44|1|A|C|1640
2O44|1|A|C|1641
2O44|1|A|G|1642
2O44|1|A|A|1643
*
2O44|1|A|U|1656
2O44|1|A|A|1657
2O44|1|A|A|1658
2O44|1|A|G|1659

Current chains

Chain A

23S rRNA

Nearby chains