J3_2O45_014

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CCAG*CGAACCGGUG*CUCGGAUGAG

Length

24 nucleotides

Bulged bases

2O45|1|A|A|777

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|C|710
2O45|1|A|C|711
2O45|1|A|A|712
2O45|1|A|G|713
*
2O45|1|A|C|745
2O45|1|A|G|746
2O45|1|A|A|747
2O45|1|A|A|748
2O45|1|A|C|749
2O45|1|A|C|750
2O45|1|A|G|751
2O45|1|A|G|752
2O45|1|A|U|753
2O45|1|A|G|754
*
2O45|1|A|C|769
2O45|1|A|U|770
2O45|1|A|C|771
2O45|1|A|G|772
2O45|1|A|G|773
2O45|1|A|A|774
2O45|1|A|U|775
2O45|1|A|G|776
2O45|1|A|A|777
2O45|1|A|G|778

Current chains

Chain A

23S rRNA

Nearby chains