J3_2O45_021

3D structure

PDB id

2O45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

AGGA*UUCAAAGAGUG*CUCACU

Length

21 nucleotides

Bulged bases

2O45|1|A|G|1067, 2O45|1|A|A|1099

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2O45|1|A|A|1065
2O45|1|A|G|1066
2O45|1|A|G|1067
2O45|1|A|A|1068
*
2O45|1|A|U|1092
2O45|1|A|U|1093
2O45|1|A|C|1094
2O45|1|A|A|1095
2O45|1|A|A|1096
2O45|1|A|A|1097
2O45|1|A|G|1098
2O45|1|A|A|1099
2O45|1|A|G|1100
2O45|1|A|U|1101
2O45|1|A|G|1102
*
2O45|1|A|C|1111
2O45|1|A|U|1112
2O45|1|A|C|1113
2O45|1|A|A|1114
2O45|1|A|C|1115
2O45|1|A|U|1116

Current chains

Chain A

23S rRNA

Nearby chains