J3_2UXB_018

3D structure

PDB id

2UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UAGGGAAC*GGUGCC*GGAGCCCUA

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2UXB|1|A|U|1000
2UXB|1|A|A|1001
2UXB|1|A|G|1001|||A
2UXB|1|A|G|1002
2UXB|1|A|G|1003
2UXB|1|A|A|1004
2UXB|1|A|A|1005
2UXB|1|A|C|1006
*
2UXB|1|A|G|1023
2UXB|1|A|G|1024
2UXB|1|A|U|1025
2UXB|1|A|G|1026
2UXB|1|A|C|1027
2UXB|1|A|C|1028
*
2UXB|1|A|G|1033
2UXB|1|A|G|1034
2UXB|1|A|A|1035
2UXB|1|A|G|1036
2UXB|1|A|C|1037
2UXB|1|A|C|1038
2UXB|1|A|C|1039
2UXB|1|A|U|1040
2UXB|1|A|A|1041

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains