J3_2UXC_006

3D structure

PDB id

2UXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGGAACCC*GGGGUGCC*GGAGCCC

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2UXC|1|A|G|1002
2UXC|1|A|G|1003
2UXC|1|A|G|1003|||A
2UXC|1|A|A|1004
2UXC|1|A|A|1005
2UXC|1|A|C|1006
2UXC|1|A|C|1007
2UXC|1|A|C|1008
*
2UXC|1|A|G|1021
2UXC|1|A|G|1022
2UXC|1|A|G|1023
2UXC|1|A|G|1024
2UXC|1|A|U|1025
2UXC|1|A|G|1026
2UXC|1|A|C|1027
2UXC|1|A|C|1028
*
2UXC|1|A|G|1033
2UXC|1|A|G|1034
2UXC|1|A|A|1035
2UXC|1|A|G|1036
2UXC|1|A|C|1037
2UXC|1|A|C|1038
2UXC|1|A|C|1039

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains