J3_2V3C_001
3D structure
- PDB id
- 2V3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the SRP54-SRP19-7S.S SRP RNA complex of M. jannaschii
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GGUG*CUUUAC*GAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_2V3C_001 not in the Motif Atlas
- Geometric match to J3_4XCO_002
- Geometric discrepancy: 0.1194
- The information below is about J3_4XCO_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35959.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
2V3C|1|M|G|145
2V3C|1|M|G|146
2V3C|1|M|U|147
2V3C|1|M|G|148
*
2V3C|1|M|C|182
2V3C|1|M|U|183
2V3C|1|M|U|184
2V3C|1|M|U|185
2V3C|1|M|A|186
2V3C|1|M|C|187
*
2V3C|1|M|G|231
2V3C|1|M|A|232
2V3C|1|M|C|233
Current chains
- Chain M
- 7S RNA
Nearby chains
- Chain C
- SIGNAL RECOGNITION 54 KDA PROTEIN
- Chain D
- SIGNAL RECOGNITION 54 KDA PROTEIN
- Chain N
- Signal recognition particle RNA; SRP RNA
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