J3_2ZJP_018
3D structure
- PDB id
- 2ZJP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thiopeptide antibiotic Nosiheptide bound to the large ribosomal subunit of Deinococcus radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGAGCUA*UAGGA*UAACCGAAC
- Length
- 22 nucleotides
- Bulged bases
- 2ZJP|1|X|A|802, 2ZJP|1|X|C|803, 2ZJP|1|X|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
2ZJP|1|X|G|695
2ZJP|1|X|U|696
2ZJP|1|X|G|697
2ZJP|1|X|A|698
2ZJP|1|X|G|699
2ZJP|1|X|C|700
2ZJP|1|X|U|701
2ZJP|1|X|A|702
*
2ZJP|1|X|U|786
2ZJP|1|X|A|787
2ZJP|1|X|G|788
2ZJP|1|X|G|789
2ZJP|1|X|A|790
*
2ZJP|1|X|U|800
2ZJP|1|X|A|801
2ZJP|1|X|A|802
2ZJP|1|X|C|803
2ZJP|1|X|C|804
2ZJP|1|X|G|805
2ZJP|1|X|A|806
2ZJP|1|X|A|807
2ZJP|1|X|C|808
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain A
- 50S RIBOSOMAL PROTEIN L2
- Chain C
- 50S RIBOSOMAL PROTEIN L4
- Chain P
- 50S RIBOSOMAL PROTEIN L22
Coloring options: