J3_2ZJR_006

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CUG*CUAAGGUAG*CGAAAG

Length

18 nucleotides

Bulged bases

2ZJR|1|X|A|1954

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

2ZJR|1|X|C|1825
2ZJR|1|X|U|1826
2ZJR|1|X|G|1827
*
2ZJR|1|X|C|1888
2ZJR|1|X|U|1909
2ZJR|1|X|A|1910
2ZJR|1|X|A|1911
2ZJR|1|X|G|1912
2ZJR|1|X|G|1913
2ZJR|1|X|U|1914
2ZJR|1|X|A|1915
2ZJR|1|X|G|1916
*
2ZJR|1|X|C|1950
2ZJR|1|X|G|1951
2ZJR|1|X|A|1952
2ZJR|1|X|A|1953
2ZJR|1|X|A|1954
2ZJR|1|X|G|1955

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain A

50S ribosomal protein L2