J3_30RA_019

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GC*GCGAAAAGAAC*GAGUGAAAAAGAACC

Length

28 nucleotides

Bulged bases

30RA|1|a|A|504, 30RA|1|a|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|G|30
30RA|1|a|C|31
*
30RA|1|a|G|474
30RA|1|a|C|475
30RA|1|a|G|476
30RA|1|a|A|477
30RA|1|a|A|478
30RA|1|a|A|479
30RA|1|a|A|480
30RA|1|a|G|481
30RA|1|a|A|482
30RA|1|a|A|483
30RA|1|a|C|484
*
30RA|1|a|G|496
30RA|1|a|A|497
30RA|1|a|G|498
30RA|1|a|U|499
30RA|1|a|G|500
30RA|1|a|A|501
30RA|1|a|A|502
30RA|1|a|A|503
30RA|1|a|A|504
30RA|1|a|A|505
30RA|1|a|G|506
30RA|1|a|A|507
30RA|1|a|A|508
30RA|1|a|C|509
30RA|1|a|C|510

Current chains

Chain a

23S rRNA

Nearby chains

Chain p

Large ribosomal subunit protein bL20

Chain r

Large ribosomal subunit protein uL22

Chain t

Large ribosomal subunit protein uL24