J3_30RA_032

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

30RA|1|a|U|2334, 30RA|1|a|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|C|2295
30RA|1|a|U|2296
30RA|1|a|A|2297
30RA|1|a|A|2298
30RA|1|a|U|2299
*
30RA|1|a|A|2317
30RA|1|a|G|2318
30RA|1|a|G|2319
30RA|1|a|U|2320
30RA|1|a|U|2321
30RA|1|a|A|2322
30RA|1|a|G|2323
*
30RA|1|a|C|2332
30RA|1|a|A|2333
30RA|1|a|U|2334
30RA|1|a|A|2335
30RA|1|a|A|2336
30RA|1|a|G|2337

Current chains

Chain a

23S rRNA

Nearby chains

Chain Z

Transfer RNA; tRNA

Chain b

5S ribosomal RNA; 5S rRNA

Chain f

Large ribosomal subunit protein uL5

Chain n

Large ribosomal subunit protein uL18

Chain v

Large ribosomal subunit protein bL27