J3_30RA_035

3D structure

PDB id

30RA (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA, mRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAAC*GUUGAU*AAUGAAC

Length

17 nucleotides

Bulged bases

30RA|1|a|U|2833, 30RA|1|a|A|2835

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RA|1|a|G|2812
30RA|1|a|A|2813
30RA|1|a|A|2814
30RA|1|a|C|2815
*
30RA|1|a|G|2831
30RA|1|a|U|2832
30RA|1|a|U|2833
30RA|1|a|G|2834
30RA|1|a|A|2835
30RA|1|a|U|2836
*
30RA|1|a|A|2882
30RA|1|a|A|2883
30RA|1|a|U|2884
30RA|1|a|G|2885
30RA|1|a|A|2886
30RA|1|a|A|2887
30RA|1|a|C|2888

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain m

Large ribosomal subunit protein bL17

Chain r

Large ribosomal subunit protein uL22

Chain z

Large ribosomal subunit protein bL32