J3_30RB_017

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GC*GCGAAAAGAAC*GAGUGAAAAAGAACC

Length

28 nucleotides

Bulged bases

30RB|1|a|A|504, 30RB|1|a|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30RB|1|a|G|30
30RB|1|a|C|31
*
30RB|1|a|G|474
30RB|1|a|C|475
30RB|1|a|G|476
30RB|1|a|A|477
30RB|1|a|A|478
30RB|1|a|A|479
30RB|1|a|A|480
30RB|1|a|G|481
30RB|1|a|A|482
30RB|1|a|A|483
30RB|1|a|C|484
*
30RB|1|a|G|496
30RB|1|a|A|497
30RB|1|a|G|498
30RB|1|a|U|499
30RB|1|a|G|500
30RB|1|a|A|501
30RB|1|a|A|502
30RB|1|a|A|503
30RB|1|a|A|504
30RB|1|a|A|505
30RB|1|a|G|506
30RB|1|a|A|507
30RB|1|a|A|508
30RB|1|a|C|509
30RB|1|a|C|510

Current chains

Chain a

23S rRNA

Nearby chains

Chain p

Large ribosomal subunit protein bL20

Chain r

Large ribosomal subunit protein uL22

Chain t

Large ribosomal subunit protein uL24