J3_38JD_001
3D structure
- PDB id
- 38JD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNA polymerase ribozyme 85h34 replication complex, subclass 2 structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- GUACCC*GACAGAAAGG*CAC
- Length
- 19 nucleotides
- Bulged bases
- 38JD|1|A|U|107, 38JD|1|A|A|134
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
38JD|1|A|G|106
38JD|1|A|U|107
38JD|1|A|A|108
38JD|1|A|C|109
38JD|1|A|C|110
38JD|1|A|C|111
*
38JD|1|A|G|128
38JD|1|A|A|129
38JD|1|A|C|130
38JD|1|A|A|131
38JD|1|A|G|132
38JD|1|A|A|133
38JD|1|A|A|134
38JD|1|A|A|135
38JD|1|A|G|136
38JD|1|A|G|137
*
38JD|1|A|C|152
38JD|1|A|A|153
38JD|1|A|C|154
Current chains
- Chain A
- RNA polymerase ribozyme 85h34
Nearby chains
- Chain C
- RNA template
- Chain B
- RNA primer
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