3D structure

PDB id
3CCJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CUCGG*CCGAUAGUGAACAAGUAG*CGAACG
Length
29 nucleotides
Bulged bases
3CCJ|1|0|C|31, 3CCJ|1|0|U|454
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

3CCJ|1|0|C|29
3CCJ|1|0|U|30
3CCJ|1|0|C|31
3CCJ|1|0|G|32
3CCJ|1|0|G|33
*
3CCJ|1|0|C|450
3CCJ|1|0|C|451
3CCJ|1|0|G|452
3CCJ|1|0|A|453
3CCJ|1|0|U|454
3CCJ|1|0|A|455
3CCJ|1|0|G|456
3CCJ|1|0|U|457
3CCJ|1|0|G|458
3CCJ|1|0|A|459
3CCJ|1|0|A|460
3CCJ|1|0|C|461
3CCJ|1|0|A|462
3CCJ|1|0|A|463
3CCJ|1|0|G|464
3CCJ|1|0|U|465
3CCJ|1|0|A|466
3CCJ|1|0|G|467
*
3CCJ|1|0|C|474
3CCJ|1|0|G|475
3CCJ|1|0|A|476
3CCJ|1|0|A|477
3CCJ|1|0|C|478
3CCJ|1|0|G|479

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 1
50S ribosomal protein L37e
Chain 2
50S ribosomal protein L39e
Chain C
50S ribosomal protein L4P
Chain T
50S ribosomal protein L24P

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1183 s