J3_3CCM_011
3D structure
- PDB id
- 3CCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.55 Å
Loop
- Sequence
- UG*CUGCAAAG*CA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3CCM_011 not in the Motif Atlas
- Geometric match to J3_4V9F_011
- Geometric discrepancy: 0.0554
- The information below is about J3_4V9F_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_60031.2
- Basepair signature
- cWW-cWW-cWW-tWH-tSH-F-F
- Number of instances in this motif group
- 7
Unit IDs
3CCM|1|0|U|27
3CCM|1|0|G|28
*
3CCM|1|0|C|480
3CCM|1|0|U|481
3CCM|1|0|G|482
3CCM|1|0|C|483
3CCM|1|0|A|484
3CCM|1|0|A|485
3CCM|1|0|A|486
3CCM|1|0|G|487
*
3CCM|1|0|C|515
3CCM|1|0|A|516
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L39e
- Chain C
- 50S ribosomal protein L4P
- Chain R
- 50S ribosomal protein L22P
- Chain T
- 50S ribosomal protein L24P
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