3D structure

PDB id
3CCS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A
Experimental method
X-RAY DIFFRACTION
Resolution
2.95 Å

Loop

Sequence
CGAUCUA*UAG*CGAG
Length
14 nucleotides
Bulged bases
3CCS|1|0|U|777, 3CCS|1|0|G|885
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_3CCS_002 not in the Motif Atlas
Homologous match to J3_4V9F_002
Geometric discrepancy: 0.0452
The information below is about J3_4V9F_002
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_64189.2
Basepair signature
cWW-tWH-cWW-tSW-F-F-cWW
Number of instances in this motif group
7

Unit IDs

3CCS|1|0|C|774
3CCS|1|0|G|775
3CCS|1|0|A|776
3CCS|1|0|U|777
3CCS|1|0|C|778
3CCS|1|0|U|779
3CCS|1|0|A|780
*
3CCS|1|0|U|866
3CCS|1|0|A|867
3CCS|1|0|G|868
*
3CCS|1|0|C|884
3CCS|1|0|G|885
3CCS|1|0|A|886
3CCS|1|0|G|887

Current chains

Chain 0
23S RIBOSOMAL RNA

Nearby chains

Chain 1
50S ribosomal protein L37e
Chain 2
50S ribosomal protein L39e
Chain A
50S ribosomal protein L2P
Chain M
50S ribosomal protein L15e

Coloring options:


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