J3_3CPW_004

3D structure

PDB id

3CPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGA*UCUAAGAAAA*UUAC

Length

17 nucleotides

Bulged bases

3CPW|1|0|A|1192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3CPW|1|0|G|1159
3CPW|1|0|G|1160
3CPW|1|0|A|1161
*
3CPW|1|0|U|1185
3CPW|1|0|C|1186
3CPW|1|0|U|1187
3CPW|1|0|A|1188
3CPW|1|0|A|1189
3CPW|1|0|G|1190
3CPW|1|0|A|1191
3CPW|1|0|A|1192
3CPW|1|0|A|1193
3CPW|1|0|A|1194
*
3CPW|1|0|U|1205
3CPW|1|0|U|1206
3CPW|1|0|A|1207
3CPW|1|0|C|1208

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain G

50S ribosomal protein L10E