J3_3CXC_014
3D structure
- PDB id
- 3CXC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGACG*CC*GAAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3CXC_014 not in the Motif Atlas
- Homologous match to J3_4V9F_017
- Geometric discrepancy: 0.0327
- The information below is about J3_4V9F_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08594.1
- Basepair signature
- cWW-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 6
Unit IDs
3CXC|1|0|U|1531
3CXC|1|0|G|1532
3CXC|1|0|A|1533
3CXC|1|0|C|1534
3CXC|1|0|G|1535
*
3CXC|1|0|C|1650
3CXC|1|0|C|1651
*
3CXC|1|0|G|1655
3CXC|1|0|A|1656
3CXC|1|0|A|1657
3CXC|1|0|A|1658
3CXC|1|0|A|1659
3CXC|1|0|G|1660
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A
- RIBOSOMAL PROTEIN L2
- Chain Y
- RIBOSOMAL PROTEIN L37AE
Coloring options: