J3_3HJW_001
3D structure
- PDB id
- 3HJW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a functional ribonucleoprotein pseudouridine synthase bound to a substrate RNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- GCG*UUC*G(FHU)GC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: FHU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01425.1
- Basepair signature
- cWW-F-F-cWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
3HJW|1|D|G|15
3HJW|1|D|C|16
3HJW|1|D|G|17
*
3HJW|1|D|U|39
3HJW|1|D|U|40
3HJW|1|D|C|41
*
3HJW|1|E|G|9
3HJW|1|E|FHU|10
3HJW|1|E|G|11
3HJW|1|E|C|12
Current chains
- Chain D
- RNA (58-MER)
- Chain E
- 5'-R(*GP*AP*GP*CP*GP*(FHU)P*GP*CP*GP*GP*UP*UP*U)-3'
Nearby chains
- Chain A
- Pseudouridine synthase Cbf5
- Chain B
- Ribosome biogenesis protein Nop10
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