J3_3I55_004

3D structure

PDB id

3I55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Mycalamide A Bound to the Large Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GGA*UCUAAGAAAA*UUAC

Length

17 nucleotides

Bulged bases

3I55|1|0|A|1192

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3I55|1|0|G|1159
3I55|1|0|G|1160
3I55|1|0|A|1161
*
3I55|1|0|U|1185
3I55|1|0|C|1186
3I55|1|0|U|1187
3I55|1|0|A|1188
3I55|1|0|A|1189
3I55|1|0|G|1190
3I55|1|0|A|1191
3I55|1|0|A|1192
3I55|1|0|A|1193
3I55|1|0|A|1194
*
3I55|1|0|U|1205
3I55|1|0|U|1206
3I55|1|0|A|1207
3I55|1|0|C|1208

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L10E

Chain I

50S ribosomal protein L11P