J3_3J5L_007
3D structure
- PDB id
- 3J5L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli 50S subunit with ErmBL nascent chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.6 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 3J5L|1|A|U|2334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3J5L_007 not in the Motif Atlas
- Homologous match to J3_5J7L_071
- Geometric discrepancy: 0.067
- The information below is about J3_5J7L_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44961.1
- Basepair signature
- cWW-tSH-F-cWW-F-tHW-cWW-tWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
3J5L|1|A|C|2295
3J5L|1|A|U|2296
3J5L|1|A|A|2297
3J5L|1|A|A|2298
3J5L|1|A|U|2299
*
3J5L|1|A|A|2317
3J5L|1|A|G|2318
3J5L|1|A|G|2319
3J5L|1|A|U|2320
3J5L|1|A|U|2321
3J5L|1|A|A|2322
3J5L|1|A|G|2323
*
3J5L|1|A|C|2332
3J5L|1|A|A|2333
3J5L|1|A|U|2334
3J5L|1|A|A|2335
3J5L|1|A|A|2336
3J5L|1|A|G|2337
Current chains
- Chain A
- 23S ribsomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
Coloring options: