J3_3J6B_003

3D structure

PDB id

3J6B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial large ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AU*AAGAAU*AUUU

Length

12 nucleotides

Bulged bases

3J6B|1|A|A|776

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3J6B|1|A|A|746
3J6B|1|A|U|747
*
3J6B|1|A|A|775
3J6B|1|A|A|776
3J6B|1|A|G|777
3J6B|1|A|A|778
3J6B|1|A|A|779
3J6B|1|A|U|780
*
3J6B|1|A|A|846
3J6B|1|A|U|847
3J6B|1|A|U|848
3J6B|1|A|U|849

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain K

54S ribosomal protein L16, mitochondrial

Chain R

54S ribosomal protein L2, mitochondrial

Chain U

54S ribosomal protein L33, mitochondrial

Chain c

54S ribosomal protein L31, mitochondrial